dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000000110_5|CGC3
Gene ID: MGYG000000110_03068
Location and strand information: 226327 - 226815 (+)
Family: 9.B.160.1.16
Protein type: TC
Protein description: Colicin V production protein

Gene clsuter ID: MGYG000000110_5|CGC3
Gene ID: MGYG000000110_03069
Location and strand information: 226849 - 228366 (+)
Family: Pribosyltran
Protein type: STP
Protein description: Amidophosphoribosyltransferase

Gene clsuter ID: MGYG000000110_5|CGC3
Gene ID: MGYG000000110_03070
Location and strand information: 228467 - 230434 (-)
Family: GH127
Protein type: CAZyme
Protein description: Non-reducing end beta-L-arabinofuranosidase
Protein isoelectric point: 5.3854
Protein molecular weight: 74350.29
NCBI Blastp with this gene.
Protein sequence: copy AA seq

Gene clsuter ID: MGYG000000110_5|CGC3
Gene ID: MGYG000000110_03071
Location and strand information: 230442 - 231845 (-)
Family: 2.A.2.3.4
Protein type: TC
Protein description: Inner membrane symporter YicJ

Gene clsuter ID: MGYG000000110_5|CGC3
Gene ID: MGYG000000110_03072
Location and strand information: 232110 - 233204 (+)
Family: LacI
Protein type: TF
Protein description: HTH-type transcriptional repressor CytR

Gene clsuter ID: MGYG000000110_5|CGC3
Gene ID: MGYG000000110_03073
Location and strand information: 233246 - 233815 (+)
Family: null
Protein type: null
Protein description: Flavin prenyltransferase UbiX

Gene clsuter ID: MGYG000000110_5|CGC3
Gene ID: MGYG000000110_03074
Location and strand information: 234108 - 234890 (+)
Family: 3.A.1.3.1
Protein type: TC
Protein description: Lysine/arginine/ornithine-binding periplasmic protein

Gene clsuter ID: MGYG000000110_5|CGC3
Gene ID: MGYG000000110_03075
Location and strand information: 235022 - 235894 (+)
Family: 3.A.1.3.29
Protein type: TC
Protein description: Histidine-binding periplasmic protein

Gene clsuter ID: MGYG000000110_5|CGC3
Gene ID: MGYG000000110_03076
Location and strand information: 235957 - 236643 (+)
Family: 3.A.1.3.1
Protein type: TC
Protein description: Histidine transport system permease protein HisQ

Gene clsuter ID: MGYG000000110_5|CGC3
Gene ID: MGYG000000110_03077
Location and strand information: 236640 - 237356 (+)
Family: 3.A.1.3.29
Protein type: TC
Protein description: Histidine transport system permease protein HisM

Gene clsuter ID: MGYG000000110_5|CGC3
Gene ID: MGYG000000110_03078
Location and strand information: 237364 - 238137 (+)
Family: 3.A.1.3.29
Protein type: TC
Protein description: Histidine transport ATP-binding protein HisP

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is arabinan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000000110_03068	Colicin V production protein	TC	226327	226815	+	9.B.160.1.16
MGYG000000110_03069	Amidophosphoribosyltransferase	STP	226849	228366	+	Pribosyltran
MGYG000000110_03070	Non-reducing end beta-L-arabinofuranosidase	CAZyme	228467	230434	-	GH127
MGYG000000110_03071	Inner membrane symporter YicJ	TC	230442	231845	-	2.A.2.3.4
MGYG000000110_03072	HTH-type transcriptional repressor CytR	TF	232110	233204	+	LacI
MGYG000000110_03073	Flavin prenyltransferase UbiX	null	233246	233815	+	Flavoprotein
MGYG000000110_03074	Lysine/arginine/ornithine-binding periplasmic protein	TC	234108	234890	+	3.A.1.3.1
MGYG000000110_03075	Histidine-binding periplasmic protein	TC	235022	235894	+	3.A.1.3.29
MGYG000000110_03076	Histidine transport system permease protein HisQ	TC	235957	236643	+	3.A.1.3.1
MGYG000000110_03077	Histidine transport system permease protein HisM	TC	236640	237356	+	3.A.1.3.29
MGYG000000110_03078	Histidine transport ATP-binding protein HisP	TC	237364	238137	+	3.A.1.3.29
Protein ID	Protein Name	Type	Start	End	Strand	Signature